BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB004D04SP1|AL425249
(986 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1578 1858 0.0
>3x_Contig1578
Length = 13178
Score = 1858 bits (934), Expect = 0.0
Identities = 971/984 (98%), Gaps = 4/984 (0%)
Strand = Plus / Minus
Query: 1 gatccgatactcgatttttgaacatcgtatccctcmatttcattcccgagtaacacctta 60
||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 1538 gatccgatact-gatttttgaacatcgtatccctcaatttcattcccgagtaacacctta 1480
Query: 61 acatcttgaatatgcgaccccacttgaacgacatcttcgctctttgcattgtgaagaact 120
||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||
Sbjct: 1479 acatcttgaatatgcgaccccacttgaacgacatcttcg---ttttgattgtgaagaact 1423
Query: 121 tcagcaatctgttgctgagttgccttaatatctacattaccagaactgacgtctcggaaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1422 tcagcaatctgttgctgagttgccttaatatctacattaccagaactgacgtctcggaaa 1363
Query: 181 tgaccccaagtagtttgaagattcttctttgagttcaatcgagattcttctgccaacttc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1362 tgaccccaagtagtttgaagattcttctttgagttcaatcgagattcttctgccaacttc 1303
Query: 241 tcttcaaagtcgtctttatcaaaattgtctaaaaaggacgaaaatacagtttcagttgat 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1302 tcttcaaagtcgtctttatcaaaattgtctaaaaaggacgaaaatacagtttcagttgat 1243
Query: 301 tgcggcggcaaaagtgtcaaattcttatgggataaaatgtttgtagtgtcaaccgccttg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1242 tgcggcggcaaaagtgtcaaattcttatgggataaaatgtttgtagtgtcaaccgccttg 1183
Query: 361 tcacttgttctcgaaatgtccccagtaataattgattcgttgtgtatacttggktccgaa 420
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 1182 tcacttgttctcgaaatgtccccagtaataattgattcgttgtgtatacttggttccgaa 1123
Query: 421 ctttcatccaaagcaaatttattagcaaatggatacattttagcttgtgtcttgagttct 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1122 ctttcatccaaagcaaatttattagcaaatggatacattttagcttgtgtcttgagttct 1063
Query: 481 tgctggatacgcttggacatgatagtatttcttcttagcggatccaacttactatcatct 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1062 tgctggatacgcttggacatgatagtatttcttcttagcggatccaacttactatcatct 1003
Query: 541 tgtgtgcggaggacatactcatcactgaattgtctaaatgcttcttgcttgaatacatga 600
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1002 tgtgtgctgaggacatactcatcactgaattgtctaaatgcttcttgcttgaatacatga 943
Query: 601 gaattcgaaatgattctcgatttgaatttaaatgaacttccgckatgatttgtcggcact 660
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 942 gaattcgaaatgattctcgatttgaatttaaatgaacttccgctatgatttgtcggcact 883
Query: 661 gatgaggtacgtgattgagtactaaattgagaattggtgctcaatgctggagatataaaa 720
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 882 gatgatgtacgtgattgagtactaaattgagaattggtgctcaatgctggagatataaaa 823
Query: 721 ctgccccctgttttctgtgagtgccaaattgacagataattctccttgtgggacgacgaa 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 822 ctgccccctgttttctgtgagtgccaaattgacagataattctccttgtgggacgacgaa 763
Query: 781 gttaaatcaattgactcgtgcgaggtctcatggtcattgaataaatcctggtcaaacatt 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 762 gttaaatcaattgactcgtgcgaggtctcatggtcattgaataaatcctggtcaaacatt 703
Query: 841 gtcgaaagtccattcataggaggcaaaggtggtagctcgattcgatyactttctctcgag 900
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 702 gtcgaaagtccattcataggaggcaaaggtggtagctcgattcgatcactttctctcgag 643
Query: 901 aagctactggttatatcccttcttccttcgtcctgaaactcaactgacatttctacatgg 960
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 642 aagctactggttatatcccttcttccttcgtcttgaaactcaactgacatttctacatgg 583
Query: 961 tgctctggtgcctgttgtgcctgt 984
||||||||||||||||||||||||
Sbjct: 582 tgctctggtgcctgttgtgcctgt 559
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6799
Number of Sequences: 1807
Number of extensions: 6799
Number of successful extensions: 30
Number of sequences better than 1.0e-20: 1
length of query: 986
length of database: 10,358,551
effective HSP length: 16
effective length of query: 970
effective length of database: 10,329,639
effective search space: 10019749830
effective search space used: 10019749830
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.4 bits)
S2: 50 (99.9 bits)